Posts Tagged ‘evolved complexity’
the evolution of complexity

Gould’s view of the movement to complexity
I’m not sure if this is a controversial topic – perhaps it depends on whether you think complexity is in some sense superior to simplicity regarding organic life, and I suspect that we humans are a bit biased on the issue.
Bacteria and archaea are still thriving in our biosphere, in vast numbers. These two classes or domains of prokaryote differ in various ways. The eukaryotes, the third domain into which organisms have been divided, are believed to have evolved from an ancestor of modern archaea.
A question. With such forms of life thriving from billions of years ago, why become more complex? In what way would it have been more advantageous? But in thinking of advantage, aren’t we thinking outside of the prokaryotic box? Shouldn’t scientists (I’ve seen this written) confine themselves to ‘how’ questions rather than ‘why’ questions? But since I’m neither a scientist nor a philosopher, I don’t know what to think.
In any case, ‘how’ questions seem quite a bit easier to answer. One way to think about it, I suppose, is to think of ‘accidents’, or simply differences, that confer an advantage. What might be called imprecise (or just varied) replications mostly wouldn’t survive, but some would turn out to be beneficial to survival, and so, over eons – complexity.
Problem solved.
Stephen Jay Gould provides an explanation for complexity in his book Life’s Grandeur, which I find overly verbose, but I think I can simplify it, in my simple way. These early prokaryotes would’ve replicated themselves almost perfectly, but not quite. Sometimes, very rarely, they would’ve missed something, or messed something up, during replication, called binary fission in prokaryotes. This would mostly have made the next generation non-viable, because generally prokaryotes are so tiny and simple that if they were any simpler they’d come up against a ‘wall’ of non-viability. The only way a different but viable next gen could be created would be if something was added rather than subtracted.
But how could this happen? Well, the ‘addition’ might be something genetic, but let’s not go there for now – Darwin didn’t need genetics to develop his theory of natural selection, nor did he need a concept of progress, though, unsurprisingly, he fell into that trap now and again. I’ve not looked deeply into binary fission but maybe the fission might occasionally lead to something not quite the same as its predecessor, in the way that archaea are not quite the same as bacteria, or that the first eukaryotes weren’t quite the same as those ancestral archaea. That’s the funny thing about the term ‘evolved from’ – it’s so easy to say, but a lot harder to pin down precisely. Anyway, maybe some kind of genetic ‘doubling up’ made some difference, a hardiness, a more diverse diet – if prokaryotes can be said to have diets. In any case, it was all about ‘more’ – a very all-encapsulating four-letter word. For example, think of stromatolites, those colonies of cyanobacteria. Was it colonisation from the start, or did some genetic change create this kind of super-organic effect?
All of this is as hard to pin down precisely as life from non-life, but we know it happened. And we also know that once life got itself well started, it thrived pretty much everywhere, not just over our planet, but quite deeply under the surface, in the most unlikely places. And considering the vast numbers, all of them replicating, the possibility of something more complicated surviving and battening on to others in an advantageous way becomes plausible, surely.
So, prokaryotes to eukaryotes. Were there intermediate stages? Let’s look at the differences. Eukaryotes are all the life we see. Prokaryotes are invisible to us without microscopes, etc. We’ve divided them into archaea and bacteria, based on a number of differences, notably the structure of their cell walls, but these structures also differ between species of bacteria. Gould has explored the issue of ‘progress’ and complexity from a bacterial perspective in the lengthy penultimate chapter of Life’s grandeur, entitled ‘The Power of the Modal Bacter, or Why the Tail can’t Wag the Dog’. I looked up Modal Bacter online and came up empty, which is why Gould irritates me so, as a writer for ‘the general public’. I’m guessing it means the bacterial mode of life. I’m going to use Gould’s chapter for the rest of this post, which looks like being a long one. So, at the beginning of the chapter, he writes this:
… simple forms still predominate in most environments, as they always have. Faced with this undeniable fact, supporters of progress (that is, nearly all of us throughout the history of evolutionary thought) have shifted criteria and ended up grasping at straws. (The altered criterion may not have struck the graspers as such a thin reed, for one must first internalise the argument of this book – trends as changes in variation rather than things moving somewhere – to recognise the weakness).
I’m not quite sure what this means, but ‘progress’ sticks out. We can make progress in learning a language/trade/sport, but has life made progress? I would tend to agree that this term isn’t useful from an evolutionary perspective. The criterial shift is surely toward complexity, and this is surely happening in the human line of development. Unfortunately we can’t measure neural complexity in our most recent ancestors – the closest living connections we have are chimps/bonobos, and here’s something from the Cambridge University Press website:
while chimpanzee brains are markedly smaller than those of humans, their brain anatomy is so similar that a discourse comparing the two might be little different from this declaration: The chimpanzee brain is a human brain with one-third of the neurons (Herculano-Houzel & Kaas, 2011).
This odd observation – very similar anatomy with one third of neurons – is a head-scratcher. I would have thought that neural organisation, perhaps especially in the prefrontal cortex, would be key here. After all, isn’t this the point of such comparisons? We’re looking at neurology to help us understand the differences we see in the culture and behaviour of Pan troglodytes and Homo sapiens, are we not? And it’s surely fair enough to say our human behaviour is more complex, what with our language, our science, our culture, our cities and whatnot? To point this out is not to be hubristic. In pointing this out we need to be aware, and many of us are, of the downsides – our altering of the atmosphere, our responsibility for species loss, and so on. I should also point out, since I’ve mentioned hubris, that free will is a myth, as I’ve argued in more than one previous post. I didn’t choose to be human, it just happened to me. Not my achievement. Nothing to be proud or ashamed of. Just something to make sense of, as best I can.
So, bearing this in mind, human complexity is worth studying, and it’s not about patting ourselves on the back. This particular complexity of humans – and it may be that, in the vastness of the universe, different living complexities have evolved – is clearly a product of evolution. We wouldn’t be here without the ‘Modal Bacter’, as Gould calls it, or without the chain of connection that goes back to the earliest life forms.
So, it seems to me, that Gould, in trying to question, or demolish, the pedestal he believes we have placed ourselves on, and to give himself credit for so doing, is missing the point by raising up the ‘Modal Bacter’, as if it should somehow be given obeisance for being the great survivor and the great progenitor, while we are the mere accidental offshoots. Take this quote (along with my insertion):
Wind back the tape of life to the origin of modern multicellular animals in the Cambrian explosion [or indeed to the ‘Modal Bacter’ millions of years before], let the tape play again from this identical starting point, and the replay will populate the earth (and generate a right tail of life) with a radically different set of creatures. The chance that this alternative set will contain anything remotely like a human being must be effectively nil, while the probability of any kind of creature endowed with self-consciousness must also be vanishingly small.
S J Gould, Life’s grandeur, p 214
There’s an obvious flaw in the logic here. If you take the tape back to the Cambrian explosion or any other point in time and replay it, you’ll get the same result, because it’s the same tape! What he presumably means, is that if some condition was changed back in the Cambrian, or earlier, then a very different result would ensue for later generations. Or, that we humans are just ‘accidents’ resulting from particular initial, or previous, conditions. And so with all life, including his much-vaunted bacteria. Not to mention all planets, stars, etc. This should hardly be seen as a revelation. Which makes me wonder just what Gould is on about.
So let’s explore further. Here’s another of his ‘critiques’:
Under the traditional model of evolutionary history as a ‘cone of increasing diversity’, life moves ever upward to greater progress, and outward to a larger number of species – from simple Cambrian beginnings for multicellular animals to our modern levels of progress and range of diversity. Under this iconography, pathways actually followed run along predictable courses that would be at least roughly repeated in any replay.
Again I find this sort of writing overly tendentious. Either life has become more diverse in expression or it has not, and this has nothing to do with progress. And researchers are exploring this question, hopefully without recourse to ‘iconography’. It may be, as Gould argues, that vertebrates were in a ‘tenuous position’ before the Cambrian explosion and that, with some tweaking of prehistory, they wouldn’t have survived and we wouldn’t be here. So presumably this means we should be more humble and less overlordly. But is this something to be humble about, or proud of? Maybe it’s worth being aware of, just as I wouldn’t exist if my parents hadn’t met. But the fact is, they did, and vertebrates didn’t go extinct. So, if we stick with the facts, life would be a little more tractable. And no need to worry about progress or perhaps even complexity. We find complexity everywhere, from bacteria to the biosphere, and on to black holes and big bangs. It’s such a fun world to explore! And that’s the thing that easily makes me remain ‘umble. The world’s complexity isn’t my doing, obviously, and I hardly comprehend even the tiniest part of it….
References
Archaea vs. Bacteria
Stephen Jay Gould, Life’s grandeur, 1996
stuff on punctuated equilibrium and organic complexity

isolation, strong selection, rapid change – an example of peripatric speciation
I’ve read a few books by Steven Jay Gould, and have found them sometimes a bit heavy-handed and clever-clever, though I’m sure I’ve learned a lot from them. I’ve also strongly disagreed with his notion of NOMA or non-overlapping magisteria, and have written about it in the long ago. The notion didn’t last long, it seems. So I’m wondering about how the concept of punctuated equilibrium, developed by Gould and others back in the day, is faring.
The idea was first proposed by Gould and Niles Eldredge in 1972. The PBS evolution library puts it this way:
… species are generally stable, changing little for millions of years. This leisurely pace is “punctuated” by a rapid burst of change that results in a new species and that leaves few fossils behind. According to this idea, the changes leading to a new species don’t usually occur in the mainstream population of an organism, where changes wouldn’t endure because of so much interbreeding among like creatures. Rather, speciation is more likely at the edge of a population, where a small group can easily become separated geographically from the main body and undergo changes that can create a survival advantage and thus produce a new, non-interbreeding species.
This is strange and interesting. I had thought that the ‘rapid burst of change’ was considered to be due to a sudden change in external conditions, brought about by, say, a burst of volcanic activity, or a massive meteorite, or whatever caused the Cambrian explosion (of new life forms) over 500 million years ago. I might return to that shortly. The type of speciation mentioned above, in which there is separation and isolation, creating unique circumstances for diversification in small populations, is called peripatric speciation. It’s one of the four modes of speciation generally recognised, the others being allopatric, parapatric and sympatric. Peripatric speciation is described as ‘a special version of the allopatric speciation mode’. A good example of this allopatric speciation mode, it seems to me, is the separation of the ancestors of bonobos and chimps into these two species about two million years ago. To back me up here’s a quote from UC Berkeley’s Understanding Evolution website:
Allopatric speciation is just a fancy name for speciation by geographic isolation… In this mode of speciation, something extrinsic to the organisms prevents two or more groups from mating with each other regularly, eventually causing that lineage to speciate. Isolation might occur because of great distance or a physical barrier, such as a desert or river…
So to round this out, I must inform myself about parapatric and sympatric speciation, which means trying to put other people’s explanations into my own words. Parapatric speciation occurs when there’s no outside barrier to gene flow (the movement of genetic material, often in the form of individual carriers of genetic material, from one population to another). Think of human migration, where the mixing of genes might not be random, due to culture barriers, but of course the chances of mixing would be much greater than if there was no migration. Sympatric speciation involves a reduction of gene flow without distancing or physical barriers. In humans it could happen when a particular set of humans breeds only with others of that set. This would take a very long time, and for humans it would involve a very artificial situation, but it has been known to occur, though rarely, in some species of insects and fish.
So, back to punctuated equilibrium. That this concept has been explored, with some evidence found but also disputed, is perhaps an indication of how novel and complex the whole topic of evolution still is. We look for traces of evolution in the fossil record, but that record is piecemeal and easily subject to ‘contamination’ over time. To be honest, much of what I’ve read from the proponents of punctuated equilibria goes over my head, requiring, it seems, an understanding of macroevolution, cladogenesis, phyletic gradualism and much much more. So I’m at a crossroads, sort of. Should I just give up, or plough on, with my not very efficient plough? How important is the topic? I really don’t know.
Here’s an example of the problem, as I see it, from ScienceDirect.com:
Cladogenesis is a phenomenon of evolution that occurs by the divergence of taxa due to positive selection for the adaptation of sister populations from a common ancestor to different environments due to their anatomical, morphological, geographic, temporal, ecological, and/or ethological (behavioural) isolation.
Ah, so that’s what cladogenesis is! But really, what’s a clado (a clade?) and what are taxa? Who’s this being written for? Obviously not dilettantes like me. I’ve turned instead to videos, and found one by someone I know well – sort of. Robert Sapolsky, whose big books Behave and Determined I’ve read with great interest in recent years. Sapolsky gives the story of gradualism versus punctuated equilibrium a humorous twist, with the proponents of gradualism calling the punctuators ‘jerks’, while they in turn were called ‘creeps’. Maybe, but is this really a big issue? Isn’t it quite reasonable to assume that just as the Earth’s biosphere itself has changed gradually but with the odd convulsion along the way, both forms of speciation, or many forms, have occurred?
So I’ve finally found a more enlightening (for me) video, obviously made some time ago, because it featured both Gould, who died in 2002, and Eldridge talking about their work, in good old layperson terms.
Anyway, for me the controversy or non-controversy over punctuated equilibrium is nowhere near as interesting as the one highlighted by Gould in his 1996 book Life’s Grandeur:
The basic theory of natural selection offers no statement about general progress, and supplies no mechanism whereby overall advance might be expected. Yet both Western culture and the undeniable facts of a fossil record that started with bacteria alone, and has now produced exalted us, cry out in unison for a rationale that will place progress into the centre of evolutionary theory.
This is particularly fascinating/amusing for me, as it plays into the ‘directed evolution’ concept which seems to me to be the god-botherers’ last hope for their world-view, though it seems to rule out ‘young Earth creationism’, though you never know with these people. I recall the late Cardinal George Pell, Australia’s most controversial Catholic, trying to argue for God-directed evolution shortly before sex-based controversies caught up with him and he disappeared from public view. Unfortunately, you need to make scientific sense of what this God-thing is, given that our planet is only one of probably billions out there, each of which has its story to tell, as part of a 13.8 billion-year universe.
Gould tries to deal with this conundrum – the undirected nature of evolution, from the point of view of ‘progress’, and how this process has produced ‘exalted us’ – in the last 60 pages or so of Life’s Grandeur, but I find that his tendency to use verbose language really gets in the way of comprehension (the key seems to be a fixed boundary condition) – so much so that I prefer to look to other sources. A research article from 2000, ‘Evolution of biological complexity’, points out, fairly obviously, that the key is to effectively define and perhaps quantify complexity – a difficult task, it seems. After all, complexity is complex.
Definitions may vary and not everyone is likely to agree, but what this article focuses on is genomic complexity, and information – ‘the amount of information a sequence stores about its environment’. I’m not sure what’s meant by a sequence here – perhaps a sequence in an evolutionary chain. The article is long and, for me, forbiddingly mathematical, but as it concludes in the abstract..
We show that, because natural selection forces genomes to behave as a natural “Maxwell Demon,” within a fixed environment, genomic complexity is forced [my emphasis] to increase.
So what is a ‘Maxwell Demon’ (I do know that it comes from James Clerk Maxwell, and that it has to do with the second law of thermodynamics), and how has this ‘proof’ fared in the 14 years since it was published?
Does the emergence of complexity of life on Earth need to be explained? Some, of course, want to explain it in terms of ‘purpose’, opening the door to agency and all that stuff, but I’m not going there. Others might worry about it in terms of that pesky second law (entropy always increases), but then there are ‘closed systems’, such as the Earth’s biosphere, which temporarily act against the ‘growth’ of entropy. Don’t worry, life will become extinct here eventually, and the whole planet will fall apart – the centre doesn’t hold.
Darwin himself was a bit contradictory about this issue. Often he enjoyed, it seems, to point out the directionlessness (to coin a word?) of natural selection, as it seemed to stick in the craws of some, but more often he fell in with his own culture and class and wrote of savages and the less advanced, in at least pseudo-evolutionary terms.
Anyway, complexity has arisen, or evolved, on this planet, so I’ll try to think about it further, with the help of reading and listening to others, in my next post.
References
https://www.pbs.org/wgbh/evolution/library/03/5/l_035_01.html
https://evolution.berkeley.edu/modes-of-speciation/peripatric-speciation/
http://www.scholarpedia.org/article/Punctuated_equilibria
Stephen Jay Gould, Life’s Grandeur: the spread of excellence from Plato to Darwin, 1996