Archive for the ‘technology’ Category
preliminary remarks preliminary to a voyage

follow the thick blue line
I’ve been working desultorily on a number of blog pieces which I’m struggling to finish, partly because they’re hard work but also because the excitement and stress is building for my maiden voyage overseas, not counting my barely-brain-developed boat-trip to Australia from Southampton aged 5 – memories include a camel train on the banks of the Suez, being rescued from drowning in the ship’s pool, and being befriended by an older kid which mainly involved being chased around the decks a lot. So from this day forth I’m devoting this blog to the trip, lots of short sharp and shiny shite, around 500 words daily, though I’m unlikely to keep to that limit, seriously.
So I’m not yet packed and wondering about the Aus$ which they say is rising and that’s good for OS travel. I’ve been described – though only by one person, my travelling companion – as a Scottish mothpurse and my main stressor is definitely $$$$ – sadly I don’t have the symbol for euros on my keyboard. I think the recent rise means cheapie flights but ours was paid-for long ago. The current Aus$ buys .68 in euros and I’ve no idea whether that’s good or bad or better than it was, whenever was was. Anyhow nothing to be done so let’s change the subject to my moustache. I thought it’d be a fine frivolity to grow one for the trip, something Frenchy and chic and daft, but after about four days’ growth it’s looking more Hitler than Charles Boyer, who was too chic to sport a tache anyway, and besides I’ve never liked them. At least my hair’s grown salt’n pepper with age, and seriously short on pepper, so it’ll be prominent as frost on a silver dust bush, and a change is as good as a haircut so I’ll leave it growing for now.
I’m at the frantically seeking advice stage. Got my first-ever passport – had to become an Australian citizen, which made me feel like a fraud come congratulations time – money-belt, international connector thingy. Downloaded Skype for myself and my travelling companion (though I won’t be using it, having no friends and family), had it explained to me that Messenger through Facebook is the cheapest form of communication – would desperately love to have an extra TC, aged about 13, to keep me straight on smartphone technostuff etc. Told to wear stockings on the flight, against DVT, which I may not, and have found hopefully the right advice against aerosynusitis, aka plane brain, which had me folded over my seatbelt on a recent flight to Melbourne. Still have to photocopy my passport, do some house-cleaning and catfood-buying for my house-sitter, and other things I can’t remember. My mind’s blanking out unpredictably so I’m sure to stuff something majorly up, but my TC’s coming over tomorrow to help with the packing and share the stress.
Okay the itinerary. A 14-day cruise or thereabouts down the Danube-Main-Rhine from Budapest to Amsterdam, after which a two-night stopover and then a train to Paris for a week’s stay on the île Saint-Louis, the walls of our cosy pied-à-terre lapped by the Seine, plus ou moins. Then down the tunnel and two nights in once-swinging London, and then, hurly-burly done, back to the serenity and quiet contemplation of home. On verra.
oil, black gold, texas tea: riding the long decline

the volatile oil price, based on Brent Crude
Canto: The price of oil, if you’re looking at Brent Crude, is just over $35 per barrel. That’s today, February 4 2016. But what’s Brent Crude, and whose dollars are we talking about, and who if anyone controls the oil price?
Jacinta: Don’t look at me. So we’re going to talk OPEC and Saudi Arabia, and gluts and reserves and peak supply and peak demand and carbon emissions and oil geopolitics now are we?
Canto: Why not? The oil price has just picked up slightly from a 12-year low of just under $30 a barrel, and nobody seems to know what’s causing the volatility, because there are so many players and factors affecting the global market. The uncertainty is as much long-term as short-term. It’s probably fair to say that the glory days of oil, that ineluctably diverse commodity, are behind us, but the decline will be slow, and we’re still a long way from finding a viable alternative in the transport sector.
Jacinta: Well, especially in air transport. So it’s hard to know where to start, but what’s OPEC?
Canto: Well you probably know that it’s an organisation of the major petroleum exporting countries, an organisation with a slightly shifting membership but always centred around the principal exporter, Saudi Arabia. It was founded in 1960, at a time when it was becoming clear that oil was the world’s most bankable commodity, and that most of that commodity was to be found in the Middle East – in Saudi in particular.
Jacinta: Right, and of course OPEC was formed to protect the interests of suppliers, and to ensure sovereignty over supply, against a background of exploitation and corruption. Not that the new ‘owners’ of the oil are any less corrupt than the previous ones.
Canto: I don’t know how useful it is for us to go into all this, I mean surely we don’t want to get caught up in the labyrinthine politics of the Middle East and its antagonists…
Jacinta: No no you’re right, though I do find it all very intriguing. I mean, this oil dependence we have is a recent phenomenon, essentially a 20th century issue, and it has had extraordinary consequences. To take just one example, it is the absolute basis of the wahabist Saud dynasty’s stranglehold on power, and I think it’s fair to say that this hasn’t been a good thing – particularly for the women of the region. I know I’m not alone in finding it demoralising that the rise to riches of Saudi Arabia in recent decades has seen no increase in freedom or in education outside of some narrow technical areas.
Canto: Yes, it’s depressing, so shall we instead focus on the commodity itself, and its future?

what this graph doesn’t tell you is most of this new oil is costly, dirty, hard-to-extract oil, from fracking, tar sands, ocean drilling etc
Jacinta: Fine well its immediate future was secured in the past with the invention of the automobile and the aeroplane. Before that the stuff was mostly used for kerosine, for heating.
Canto: And don’t forget plastics.
Jacinta: Absolutely but as I’ve said, it’s the transport sector that’s most dependent on oil, so how do we solve that problem, assuming we want to wean ourselves from the stuff?
Canto: But are there really any serious alternatives? I mean you mentioned air travel. We’ve heard of electric cars, solar cars, hydrogen cars, but air travel? Remember the Hindenburg?
Jacinta: Well I heard one expert put it this way. The world is largely tooled for liquid fuel – that’s petrol, LPG, diesel etc. That’s an investment of multi-trillions of dollars, an investment that continues every day. And there’s no viable alternative ready to go now or in the foreseeable, and even if there was, trashing all this perfectly functional machinery and all the ancillary technology and business that connects to the oil and gas industry – the consequences need to be realistically considered. You can’t be too simplistic about this stuff. So it is going to be incremental change no matter what.
Canto: So you mean a continual tinkering with current fuels to minimise their environmental impact while experimenting with new forms of fuel which we might be able to exploit without too much retooling.
Jacinta: Yes, at least not in the short term.
Canto: So how does LPG compare with petrol in terms of viability and environmental impact? I know there are those in the oil and gas industries who point to gas as a ‘green’ alternative, while others like Naomi Klein dismiss it as just another fossil fuel. Is it plausible or sensible to aim for LPG as the predominant road fuel while developing renewable alternatives?
Jacinta: Well there seems to be quite a few problems with LPG technology in cars – lots of extra plumbing and wiring, things to go wrong, high costs to fix problems, no doubt largely due to it being a minority system. And that’s the main problem – LPG has been around for a long time now but has never really taken off and been seriously competitive with petrol. That means availability is limited – a major inconvenience – and maintenance costs will be higher. That doesn’t look like changing.
Canto: How about biofuels? They were all the rage a while back but they seem to have gone out of fashion. Something about wasting good food, or grain or whatever, and the precious land to grow it on, on something so trivial as travel.
Jacinta: Well yes, there are those problems but there’s a new, or newish idea being worked on re biofuels – the use of algae. But I plan to write about that, and other possible solutions, on our other blog, Solutions OK.
Canto: Yes, and that’s also the place to consider the future of autonomous vehicles, and even autonomous electric vehicles, because it’s quite likely, isn’t it, that if these vehicles eventually take off (and I don’t mean flying vehicles, though they’ve also been developed), they could revolutionise our road usage, and why wouldn’t we use a better source of energy, such as electricity – already a proven technology for road transport, pre-dating the infernal combustion engine, or at least its use in motor vehicles.

the future – vehicles so autonomous they refuse to have passengers
Jacinta: Yes, so talk about future energy solutions is verboten here, and talk about geopolitics is obviously beneath us, so what’s left?
Canto: We’ll think of something, next time.
more on Einstein, black holes and other cosmic stuff

Einstein at Mount Wilson in 1931, staring at a wee bit of the universe, with Edwin Hubble
Jacinta: Well Canto I’d like to get back to Einstein and space and time and the cosmos, just because it’s such a fascinating field to inhabit and explore.
Canto: Rather a big one.
Jacinta: I’ve read, or heard, that Einstein’s theory, or one of them, predicted black holes, though he didn’t necessarily think that such entities really existed, but now black holes are at the centre of everything, it seems.
Canto: Including our own galaxy, and most others.
Jacinta: Yes, and there appears to be a correlation between the mass of these supermassive black holes at the centres of galaxies and the mass of the galaxies themselves, indicating that they appear to be the generators of galaxies. Can you expand on that?
Canto: Well the universe seems to be able to expand on that better than I can, but I’ll try. Black holes were first so named in the 1960s, but Einstein’s theory of general relativity recast gravity as a distortion of space and time rather than as a Newtonian force, with the distortion being caused by massive objects. The greater the mass, the greater the distortion, or the ‘geodetic effect’, as it’s called. The more massive a particular object, given a fixed radius, the greater is the velocity required for an orbiting object to escape its orbit, what we call its escape velocity. That escape velocity will of course, approacher closer and closer to the speed of light, as the object being orbited becomes more massive. So what happens when it reaches the speed of light? Then there’s no escape, and that’s where we enter black hole territory.
Jacinta: So, let me get this. Einstein’s theory is about distortions of space-time (and I’m not going to pretend that I understand this), or geodetic effects, and so it has to account for extreme geodetic effects, where the distortion is so great that nothing, not even light, can escape, and everything kind of gets sucked in… But how do these massive, or super-massive objects come into being, and won’t they eventually swallow all matter, so that all is just one ginormous black hole?
Canto: Okay I don’t really get this either but shortly after Einstein published his theory it was worked out by an ingenious astrophysicist, Karl Schwarzschild – as a result of sorting out Einstein’s complex field equations – that if matter is severely compressed it will have weird effects on gravity and energy. I was talking a minute ago about increasing the mass, but think instead of decreasing the radius while maintaining the mass as a constant…
Jacinta: The same effect?

Karl Schwarzschild
Canto: Well, maybe, but you’ll again reach a point where there’s zero escape, so to speak. In fact, what you have is a singularity. Nothing can escape from the object’s surface, whether matter or radiation, but also you’ll have a kind of internal collapse, in which the forces that keep atoms and sub-atomic particles apart are overcome. It collapses into an infinitesimal point – a singularity. It was Schwarzschild too who described the ‘event horizon’, and provided a formula for it.
Jacinta: That’s a kind of boundary layer, isn’t it? A point of no return?
Canto: Yes, a spherical boundary that sort of defines the black hole.
Jacinta: So why haven’t I heard of this Schwarzschild guy?
Canto: He died in 1916, shortly after writing a paper which solved Einstein’s equations and considered the idea of ‘point mass’ – what we today would call a singularity. But both he and Einstein, together with anyone else in the know, would’ve considered this stuff entirely theoretical. It has only become significant, and very significant, in the last few decades.
Jacinta: And doesnt this pose a problem for Einstein’s theory? I recall reading that this issue of ‘point mass’, or a situation where gravity is kind of absolute, like with black holes and the big bang, or the ‘pre-big bang’ if that makes sense, is where everything breaks down, because it seems to bring in the mathematical impossibility of infinity, something that just can’t be dealt with mathematically. And Einstein wasn’t worried about it in his time because black holes were purely theoretical, and the universe was thought to be constant, not expanding or contracting, just there.
Canto: Well I’ve read – and I dont know if it’s true – that Einstein believed, at least for a time, that black holes couldn’t actually exist because of an upper limit imposed on the gravitational energy any mass can produce – preventing any kind of ‘infinity’ or singularity.
Jacinta: Well if that’s true he was surely wrong, as the existence of black holes has been thoroughly confirmed, as has the big bang, right?
Canto: Well of course knowledge was building about that in Einstein’s lifetime, as Edwin Hubble and others provided conclusive evidence that the universe was expanding in 1929, so if this expansion was uniform and extended back in time, it points to an early much-contracted universe, and ultimately a singularity. And in fact Einstein’s general relativity equations were telling him that the universe wasn’t static, but he chose to ignore them, apparently being influenced by the overwhelming thinking of the time – this was 1917 – and he introduced his infamous or famous cosmological constant, aka lambda.
Jacinta: And of course 1917 was an early day in the history of modern astronomy, we hardly knew anything beyond our own galaxy.
Canto: Or within it. One of the great astrophysicists of the era, Sir Arthur Eddington, believed at the time that the sun was at the centre of the universe, while admitting his calculations were ‘subject to large uncertainties’.
Jacinta: Reminds me of Lord Kelvin on the age of the Earth only a few generations before.
Canto: Yes, how quickly our best speculations can become obsolete, but that’s one of the thrills of science. And it’s worth noting that the work of Hubble and others on the expansion of the universe depended entirely on improved technology, namely the 100-inch Hooker telescope at Mount Wilson, California.
Jacinta: Just as the age of the Earth problem was solved through radiometric dating, which depended on all the early twentieth century work on molecular structure and isotopes and such.
Canto: Right, but now this lambda (λ) – which Einstein saw as a description of some binding force in gravity to counteract the expansion predicted by his equations – is very much back in the astrophysical frame. The surprising discovery made in 1998 that the universe’s expansion is accelerating rather than slowing has, for reasons I can’t possibly explain, brought Einstein’s lambda in from the cold as an explanatory factor in that discovery, which is also somehow linked to dark energy.
Jacinta: So his concept, which he simply invented as a ‘fix-it’ sort of thing, might’ve had more utility than he knew?
Canto: Well the argument goes, among some, that Einstein was a scientist of such uncanny insight that even his mistakes have proved more fruitful than others’ discoveries. Maybe that’s hero worship, maybe not.
Jacinta: So how does lambda relate to dark energy, and how does dark energy relate to dark matter, if you please?
Canto: Well the standard model of cosmology (which is currently under great pressure, but let’s leave that aside) has been unsuccessful in trying to iron out inconsistent observations and finding with regard to the energy density of the universe, and so dark energy and what they call cold dark matter (CDM) have been posited as intellectual placeholders, so to speak, to make the observations and equations come out right.
Jacinta: Sounds a bit dodgy.
Canto: Well, time will tell how dodgy it is but I don’t think anyone’s trying to be dodgy, there’s a great deal of intense calculation and measurement involved, with so many astrophysicists looking at the issue from many angles and with different methods. Anyway, to quickly summarise CDM and dark energy, they together make up some 96% of the mass-energy density of our universe according to the most currently accepted calculations, with dark energy accounting for some 69% and CDM accounting for about 27%.
Jacinta: Duhh, that does sound like a headachey problem for the standard model. I mean, I know I’m only a dilettanty lay-person, but a model of universal mass-energy that only accounts for about 4% of the stuff, that doesn’t sound like much of a model.
Canto: Well I can assure they’re working on it…
Jacinta: Or working to replace it.
Canto: That too, but let me try to explain the difference between CDM and dark energy. Dark energy is associated with lambda, because it’s the ‘missing energy’ that accounts for the expansion of the universe, against the binding effects of gravity. As it happens, Einstein’s cosmological constant pretty well perfectly counters this expansive energy, so that if he hadn’t added it to his equations he would’ve been found to have predicted an expanding universe decades before this was confirmed by observation. That’s why it was only in the thirties that he came to regret what he called the greatest mistake of his career. Cold dark matter, on the other hand, has been introduced to account for a range of gravitational effects which require lots more matter than we find in the observed (rather than observable) universe. These effects include the flat shapes of galaxies, gravitational lensing and the tight clustering of galaxies. It’s described as cold because its velocity is considerably less than light-speed.

the lambda- cold dark matter model
Jacinta: Okay, so far so bad, but let’s get back to black holes. Why are they so central?
Canto: Well, that’s perhaps the story of supermassive black holes in particular, but I suppose I should try to tell the story of how astronomers found black holes to be real. As I’ve said, the term was first used in the sixties, 1967 to be precise, by John Wheeler, at a time when their actual existence was being considered increasingly likely, and the first more or less confirmed discovery was made in 1971 with Cygnus x-1. You can read all about it here. It’s very much a story of developing technology leading to increasingly precise observational data, largely in the detecting and measuring of X-ray emissions, stuff that was undetectable to us with just optical instruments.
Jacinta: Okay, go no further, I accept that there’s been a lot of data from a variety of sources that have pretty well thoroughly confirmed their existence, but what about these supermassive black holes? Could they actually be the creators of matter in the galaxies they’re central to? That’s what I’ve heard, but my reception was likely faulty.
Canto: Well astrophysicists have been struggling with the question of this relationship – there clearly is a relationship between supermassive black holes and their galaxies, but which came first? Now supermassive black holes can vary a lot – our own ‘local’ one is about 4 million solar masses, but we’ve discovered some with billions of solar masses. But it was found almost a decade ago that there is correlation between the mass of these beasties and the mass of the inner part of the galaxies that host them – what they call the galactic bulge. The ratio is always about 1 to 700. Obviously this is highly suggestive, but it requires more research. There are some very interesting examples of active super-feeding black holes emitting vast amounts of energy and radiation, which is both destructive and productive in a sense, creating an active galaxy. Our own Milky Way, or the black hole at its centre, is currently quiescent, which is just as well.
Jacinta: You mean if it starts suddenly feeding, we’re all gonna die?
Canto: No probably not, the hole’s effects are quite localised, relatively speaking, and we’re a long way from the centre.
Jacinta: Okay thanks for that, that’s about as much about black holes as I can stand for now.
Canto: Well I’m hoping that in some future posts we can focus on the technology, the ground-based and space-based telescopes and instruments like Hubble and Kepler and James Webb and so many others that have been enhancing our knowledge of black holes, other galaxies, exoplanets, all the stuff that makes astrophysics so rewarding these days.
Jacinta: You’re never out of work if you’re an astrophysicist nowadays, so I’ve heard. Halcyon days.

an x-ray burst from a supermassive black hole – artist’s impression
Einstein, science and the natural world: a rabid discourse

Einstein around 1915
Canto: Well, we’re celebrating this month what is surely the greatest achievement by a single person in the history of science, the general theory of relativity. I thought it might be a good time to reflect on that achievement, on science generally, and on the impetus that drives us to explore and understand as fully as possible the world around us.
Jacinta: The world that made us.
Canto: Précisément.
Jacinta: Well, first can I speak of Einstein as a political animal, because that has influenced me, or rather, his political views seem to chime with mine. He’s been described as a supra-nationalist, which to me is a kind of political humanism. We’re moving very gradually towards this supra-nationalism, with the European Union, the African Union, and various intergovernmental and international organisations whose goals are largely political. Einstein also saw the intellectual venture that is science as an international community venture, science as an international language, and an international community undertaking. And with the development of nuclear weapons, which clearly troubled him very deeply, he recognised more forcefully than ever the need for us to take international responsibility for our rapidly developing and potentially world-threatening technology. In his day it was nuclear weapons. Today, they’re still a threat – you’ll never get that genie back in the bottle – but there are so many other threats posed by a whole range of technologies, and we need to recognise them, inform ourselves about them, and co-operate to reduce the harm, and where possible find less destructive but still effective alternatives.
Canto: A great little speech Jas, suitable for the UN general assembly…
Jacinta: That great sinkhole of fine and fruitless speeches. So let’s get back to general relativity, what marks it off from special relativity?
Canto: Well I’m not a physicist, and I’m certainly no mathematician, but broadly speaking, general relativity is a theory of gravity. Basically, after developing special relativity, which dealt with the concepts of space and time, in 1905, he felt that he needed a more comprehensive relativistic theory incorporating gravity.
Jacinta: But hang on, was there really anything wrong with space and time before he got his hands on them? Why couldn’t he leave them alone?
Canto: OMG, you’re taking me right back to basics, aren’t you? If I had world enough, and time…
Jacinta: Actually the special theory was essentially an attempt – monumentally successful – to square Maxwell’s electromagnetism equations with the laws of Newton, a squaring up which involved enormous consequences for our understanding of space and time, which have ever since been connected in the concept – well, more than a concept, since it has been verified to the utmost – of the fourth, spacetime, dimension.
Canto: Well done, and there were other vital implications too, as expressed in E = mc², equivalating mass and energy.
Jacinta: Is that a word?
Canto: It is now.
Jacinta: So when can we stop pretending that we understand any of this shite?
Canto: Not for a while yet. The relevance of relativity goes back to Galileo and Newton. It all has to do with frames of reference. At the turn of the century, when Einstein was starting to really focus on this stuff, there was a lot of controversy about whether ‘ether’ existed – a postulated quasi-magical invisible medium through which electromagnetic and light waves propagated. This ether was supposed to provide an absolute frame of reference, but it had some contradictory properties, and seemed designed to explain away some intractable problems of physics. In any case, some important experimental work effectively quashed the ether hypothesis, and Einstein sought to reconcile the problems by deriving special relativity from two essential postulates, constant light speed and a ‘principle of relativity’, under which physical laws are the same regardless of the inertial frame of reference.

the general theory – get it?
Jacinta: What do you mean, ‘the initial frame of reference’?
Canto: No, I said ‘the inertial frame of reference’. That’s one that describes all parameters homogenously, in such a way that any such frame is in a constant motion with respect to other such frames. But I won’t go into the mathematics of it all here.
Jacinta: As if you could.
Canto: Okay. Okay. I won’t go any further in trying to elucidate Einstein’s work, to myself, you or anyone else. At the end of it all I wanted to celebrate the heart of Einstein’s genius, which I think represents the best and most exciting element in our civilisation.
Jacinta: Drumroll. Now, expose this heart to us.
Canto: Well we’ve barely touched on the general theory, but what Einstein’s work on gravity teaches us is that by not leaving things well alone, as you put it, we can make enormous strides. Of course it took insight, hard work, and a full and deep understanding of the issues at stake, and of the work that had already been done to resolve those issues. And I don’t think Einstein was intending to be a revolutionary. He was simply exercised by the problems posed in trying to understand, dare I say, the very nature of reality. And he rose to that challenge and transformed our understanding of reality more than any other person in human history. It’s unlikely that anything so transformative will ever come again – from the mind of a single human being.
Jacinta: Yes it’s an interesting point, and it takes a particular development of culture to allow that kind of transformative thinking. It took Europe centuries to emerge from a sort of hegemony of dogmatism and orthodoxy. During the so-called dark ages, when warfare was an everyday phenomenon, and later too, right through to the Thirty Years War and beyond, one thing that could never be disputed amongst all that disputation was that the Bible was the word of God. Nowadays, few people believe that, and that’s a positive development in the evolution of culture. It frees us to look at morality from a broader, richer, extra-Biblical perspective..
Canto: Yes we no longer have to even pretend that our morality comes from such sources.
Jacinta: Yes and I’m thinking of other parts of the world that are locked in to this submissive way of thinking. A teaching colleague, an otherwise very liberal Moslem, told me the other day that he didn’t believe in gay marriage, because the Qu-ran laid down the law on homosexuals, and the Qu-ran, because written by God, is perfect. Of course I had to call BS on that, which made me quite sad, because I get on very well with him, on a professional and personal basis. It just highlights to me the crushing nature of culture, how it blinds even the best people to the nature of reality.
Canto: Not being capable of questioning, not even being aware of that incapability, that seems to me the most horrible blight, and yet as you say, it wasn’t so long ago that our forebears weren’t capable of questioning the legitimacy of Christianity’s ‘sacred texts’, in spite of interpreting those remarkably fluid texts in myriad ways.
Jacinta: And yet out of that bound-in world, modern science had its birth. Some modern atheists might claim the likes of Galileo and Francis Bacon as one of their own, but none of our scientific pioneers were atheists in the modern sense. Yet the principles they laid down led inevitably to the questioning of sacred texts and the gods described in them.
Canto: Of course, and the phenomenal success of the tightened epistemology that has produced the scientific and technological revolution we’re enjoying now, with exoplanets abounding, and the revelations of Homo floresiensis, Homo naledi and the Denisovan hominin, and our unique microbiome, and recent work on the interoreceptive tract leading to to the anterior insular cortex, and so on and on and on, and the constant shaking up of old certainties and opening up of new pathways, all happening at a giddying accelerating rate, all of this leaves the ‘certainty of faith’ looking embarrassingly silly and feeble.
Jacinta: And you know why ‘I fucking love science’, to steal someone else’s great line? It’s not because of science itself, that’s only a means. It’s what it reveals about our world that’s amazing. It’s the world of stuff – animate and inanimate – that’s amazing. The fact that this solid table we’re sitting at is made of mostly empty space – a solidity consisting entirely of electrochemical bonds, if that’s the right term, between particles we can’t see but whose existence has been proven a zillion times over, and the fact that as we sit here on a still, springtime day, with a slight breeze tickling our faces, we’re completely oblivious of the fact that we hurtling around on the surface of this earth, making a full circle every 24 hours, at a speed of nearly 1700 kms per hour. And at the same time we’re revolving around the sun at a far greater speed, 100,000 kms per hour. And not only that, we’re in a solar system that’s spinning around in the outer regions of our galaxy at around 800,000 kilometres an hour. And not only that… well, we don’t feel an effing thing. It’s the counter-intuitive facts about the natural world that our current methods of investigation reveal – these are just mind-blowing. And if your mind doesn’t get blown by it, then you haven’t a mind worth blowing.
Canto: And we have two metres of DNA packed into each nucleus of the trillions of cells in our body. Who’d’ve thunkit?

whatever
reveries of a solitary wa*ker: wa*k 3
Having finished reading the big Darwin book I’m letting the influence of his character and world percolate through me, for example on my way home from work the other day, walking by the city river, I got the idea of taking pics of the bird species hanging by the riverside with my mobile phone – murray magpie, mallard, eurasian coot, black swan, masked lapwing, Australian pelican, Australian magpie, dusky moorhen, Australian white ibis and little pied cormorant. It really brightened my day, though the photos were pretty crappy, but I looked up the species when I got home (this is where the internet really comes into its own) and learned so much about habitats, male-female differences (the male murray magpie, or magpie-lark, has a white ‘eyebrow’ and a black throat) and such. Fun, and now I’m thinking about a good camera for bird-watching. I’ve also, on something of an impulse, bought a digital microscope, on its way from the USA. No idea as yet what to use it for.
At a recent meetup group I had a stimulating discussion, or rather listened in on one, about the end of humanity, the various possibilities for our impending doom, the principal one being artificial intelligence. The idea is that so many things that humans are engaged in are barely in control, and that the best option for the survival of a species isn’t constant change and development, but stasis, as with trilobites perhaps, or some types of bacteria. Since this appears not to be an option for us, some think that we’re hurtling, with all our good intentions, not towards the singularity, but towards extinction. Anthropogenic global warming, mass species extinction, human-induced epidemics, out-of-control artificial intelligence, or a combination of these might cause this event, but it was the view of one conversationalist that AI would be our undoing, and possibly quite soon. It might lead to a gradual transhumanism, which we won’t recognise until it’s too late. One of the key figures mentioned in analysis of humanity’s possibly grim future was Nick Bostrum, whose name has come to my attention from time to time. Wikipedia tells me he’s a philosopher based at Oxford, and the director of its Future of Humanity Institute. So, a person and an institute I should be conversant with for my solutions ok blog. I should probably link to it there, and it’ll mean a lot more reading and study, groan. Meanwhile, one of the arguments I heard the other night was that this could explain why we don’t find complex life out there looking for us, with their super-clever antimatter rockets and super light-speed travel techniques, because complexity of that sort beats an inevitable path to destruction. Highly-developed life-forms like us and our superiors burn with brief intensity then snuff themselves out. For us, this might be sooner than later. Hmmmm. In any case, existential risk is something I’ll have to pay more attention to in the future, if we have one.
The other day I was listening to the amusing Answer Me This podcast when the name Marky Mark came up – apparently an actor, for he was chosen to star in Peter Jackson’s film The Lovely Bones. Not being too keyed in on popular culture, I’d never heard of Marky Mark (or The Lovely Bones for that matter) so I looked him up. It turned out that this was an early moniker for the actor Mark Wahlberg – whose name I’d heard of, but that was about it. Having now seen some photos of him, I don’t think I’ve seen him in anything, and I had no idea that in his early life as Marky Mark he was a notorious rapper and petty crim. But interestingly, I read that Wahlberg was now seeking a government pardon for the crimes he was convicted of as a teenager – including a few bashings of Asian-looking people. One of these incidents resulted in the victim having permanent eye damage. I don’t automatically trust too many internet sites, but the story appears to be that Marky, as a probably drug-fuelled and undoubtedly peer-influenced teen, indulged in some pretty nasty behaviour, spiced with language about ‘gooks and ‘slopes’, but he did have potential – don’t we all – and with the help of mentors he turned his life around to become, eventually, a Hollywood ‘star’. He did receive punishment for some of his crimes – and I read that he was tried as an adult for at least one of them – probably the one in which a victim lost an eye, or part of one….
I mention all this because it’s a case that raises a number of fascinating and important ethical issues. Firstly, there’s the tendency, most prevalent in the US but increasingly here too, to try juveniles as adults when they commit serious crimes, as if their ability to be fully responsible for their actions is in direct proportion to the damage they do. This smacks of a slide down the slippery slope of retributive justice – people have been really really hurt so the perp has to be really really punished, no matter that she’s eleven years old. While I have some sympathy for that attitude, and I’ll elaborate on that later, we have to accept that teenagers and children are different and that there are good, scientifically verified reasons for granting them diminished responsibility in a graded way from earliest childhood to the latest teens. The law is always a bit of a bludgeon of course, rarely taking full account of individual developmental and psychological peculiarities, which is one of the problems of ‘equality before the law’, but there’s no doubt that we generally do stupid things as teenagers and school kids, often under peer pressure, things we’d never do as mature adults. I myself got into trouble with the law for stealing, together with four or five of my friends, at the age of fourteen. We’d been egging each other on, and we perpetrated a lot more than we were charged with, but it all came crashing to a halt when we got caught. None of us were nasty brutish types, and it’s unlikely that any of us have reoffended.
Marky’s offending was rather brutish though, with serious consequences for a least one victim. His desire for a pardon is apparently driven by the fact that he’s disqualified at the moment from getting an Oscar or other accolades because of his past. Unlike me he has a permanent criminal record presumably due to being tried as an adult. He’s written a letter to government authorities wanting recognition for being an entirely different person than the one who committed those acts. Marky now does charitable work on the side like many other Hollywood stars – which is fine and dandy especially as they’re significantly overpaid for what they do and would have good reason to consider themselves bloody lucky to be in their position – but as online critics have pointed out, he’s never apologised or made reparations to his permanently-scarred victim. It goes without saying that this soul has also had a change of life since being bashed with a two-by-four all those years ago. Not much work for a one eyed Asian in Hollywood, methinks.
So this is the dilemma. Why doesn’t Marky Mark face up to the damage he did by trying to help the one person whose life he changed irreparably as an oafish teenager? That would seem to be an obvious move. And that brings me back to the treatment of serious crimes committed by persons of diminished responsibility. The reason we seek to impose harsher penalties, and for that reason to attribute greater responsibility to the young perpetrator, is because of the consequences of the crime. We believe someone has to pay for all that damage, and if not the perp, then who? It’s a really vexed question, but imposing an extremely harsh penalty on an adolescent for an extreme crime doesn’t really help, especially when the penalty, such as a prison term, will tend to harden the adolescent and make him more resentful, angry, and subject to bad influence, than he was before.
Unfortunately, we don’t live in a very forgiving society, a society which immediately seeks to help adolescents who’ve gone off the rails to the extent that Marky Mark presumably did – and I should make it clear here that I’m just using him as an example, and I’ve no idea if the facts of his case are exactly as, or even close to, what I’ve reported (I got it off the internet after all). As part of that help, he should’ve been made to face the living consequences of the damage he had done, the suffering and change he had wrought in the lives of others. But that of course would require a massive change in our system of crime and punishment. For adolescent crime though, I think it would work well, and to be fair, it does operate to some extent in some juvenile court systems, conferencing between perpetrators and victims and their families, though there isn’t enough of it, I suspect.
want to live to 100?
… It may destroy diseases of the imagination, owing to too deep a sensibility, and it may attach the affections to objects, permanent, important, and intimately related to the interests of the human species.
Humphry Davy, on the value of science, in ‘Discourse introductory to a course of lectures on chemistry’, 1802
A great many of us would like to live a long and healthy life, with a greater emphasis on health than length. But both please, if possible, thanks.
I’ve been reading the issues of New Scientist: the collection as they come out. The first issue dealt with the Big Questions, namely Reality, Existence, God, Consciousness, Life, Time, Self, Sleep and Death. Bit of a roller coaster ride, leaving me dizzy, confused, but often enlightened, and sometimes even exhilarated. So, better than a roller coaster. The second issue, entitled The Unknown Universe, took me far out beyond multiverses, quantum loops, energetic dark matter and the eventful horizons of black holes, and essentially taught me that modern cosmology is a mess of competing theories, often competing, it seemed, to be the most egregious ideas that are compatible with mathematical possibility. However, it may be that the studious avoidance of scary maths in these essays/summaries may have made them seem more loopy (or strangulatingly stringy) than they are.
The third issue was more down to earth, and not only earth but me, and you, dear reader. It’s entitled The scientific guide to a better you, and it’s all about longevity, health and success.
So what’s the secret, at least for the first two? Basically, eat healthily, with not too much meat, make sure you have good genes, don’t be too much of a loner (too late for me, I’ve been a loner for 40 years, and that’s unlikely to change, but I’l try, as I always say), be intelligent, active and exploratory. That’s the message of the first half of this issue anyway.
What interested me, though, was the detail. Measurements. Blood sugar, cholesterol, heart rate and many other factors and parameters, most of which I didn’t know I had to be concerned about. The various essays are peppered with these measures of health or lack thereof, but how does your average Jo like me get a measure of these things without pestering doctors on a weekly basis about wellness instead of sickness?
So, for fun, I thought I’d look into these ways of measuring ourselves and see if we can manage them from home. A sort of practical guide to centenarianism and beyond.
1. Body mass index (BMI)
Your BMI is a very rough-and-ready guide to whether or not you’re a healthy weight for your height. Various websites can calculate this for you instantly if you know your height and weight. My current BMI is 26, according to the Heart Foundation, which it regards as ‘overweight’, though very close to the borderline between ‘overweight’ and ‘healthy’. About three years ago my BMI was 29, well into the overweight category, in fact getting close to obese. I decided to eat less, without fasting or ‘going on a diet’, and to try to up my exercise, and over a 2-year period I brought my BMI down from 29 to 23, well into the healthy range. Since then it has crept back up to 26, and I’m struggling to get it back down again. I just need to lose a couple of kilos, and keep them off. The myriad other ways of measuring your health these days might make the old BMI seem outmoded – it doesn’t measure your fat to muscle ratio, for example, or the amount of fat around your heart and other organs – but I find it a useful guide for me, and the cheapest available.
2. Heart rate/blood pressure
Measured in beats per minute, your heart rate naturally varies with exertion, and also with anxiety, stress, illness, drug use and so on. The normal resting heart rate for an adult human ranges from 60 to 100 bpm. You can measure your own heart rate (your pulse) at any time by finding an artery close to the surface. The radial artery on the wrist, the one you see heading in the direction of the thumb, is commonly used due to ease of location, but don’t try it with your thumb which has its own strong pulse. I’ve just located my own wrist pulse and measured it as 62bpm. That’s the first time I’ve ever done it. However, I imagine it would be harder to measure after a bout of HIIT (high intensity interval training), which I sometimes indulge in, or after a moderately strenuous bike-ride. It would be even harder while you’re in the middle of exercise, so that’s where heart rate monitors, including those that can be worn on the wrist, come in handy. A quick google-glance tells me that such wrist devices are selling at $100 to $150. However, caveat emptor, as doubt is being cast on their accuracy. Electrocardiographs (ECGs, or EKGs), which measure the electrical activity of your heart, provide a much more accurate record than heart rate monitors, which are apparently only really effective when you’re at rest. One of the problems is that these optical monitors use light to track your blood, and to get an ‘accurate’ reading, you need to be very still, which sort of defeats the purpose. Reporter Sharon Profis, with the help of cardiologist Jon Saroff of Kaiser Permanente medical center in San Francisco compared various wrist monitor brands with the gold standard EKG measurements, and found them well off-beam especially at over 100 bpm. However, the Garmin Vivofit chest strap monitor, which measures electrical activity, was very accurate. This device can be bought for around $150 in Australia.
3. Cholesterol
Cholesterol’s an essential organic molecule, a sterol, a structural component of our cell membranes. It’s biosynthesised, mainly by our liver cell, often as a precursor to such vital entities as steroid hormones and vitamin D, and researchers have tracked the 37-step process of its synthesis. Cholesterol is transported through the blood within lipoproteins, and that’s where you get HDL (high-density lipoprotein) and LDL (low-density lipoprotein) cholesterol, of which the former is the one that causes problems. Some 32% of Australian adults have high blood cholesterol, the primary cause of atherosclerosis, leading to clogging of major blood vessels. Ways of lowering your LDL levels include not smoking, avoiding transfats, regular moderate exercise, and healthy eating including fruit, veg, grains and pulses and sterol-enriched foods. But of course you know all that. The big question is, can you measure your cholesterol from home? The current answer appears to be no, according to the Harvard Medical School (though I note that their article is 11 years old). The problem is that home testing kits can’t separate the ‘good’ HDL cholesterol from the ‘bad” (LDL). Measuring your overall cholesterol levels might be useful, but the real issue is the proportion that is LDL, not to mention that cholesterol can also be carried by other molecules such as triglycerides.
4. Blood sugar/glucose
Glucose is a vital source of energy for the body’s cells, and its levels are associated with the hormone insulin, produced by the pancreas. Blood glucose levels naturally vary throughout the day, and having a level regularly above normal is termed hyperglycemia. Hypoglycemia is the term for low levels. Diabetes (technically Diabetes mellitus) is the disease most commonly associated with high blood sugar. General symptoms are frequent urination, hunger pangs and increased thirst. The mean normal blood sugar level is around 5.5 mM (millimolars). That’s the international standard measure – the Americans measure it differently, which causes the usual confusion. Not surprisingly, considering the global rise in diabetes, blood glucose meters for use at home are readily available, but they’re mostly specially devised for use by diabetics, supervised by healthcare professionals. You can of course buy one and DIY but you must learn to be inured to pricks, and unless you’re at risk, which I’m not, as I don’t have much of a sweet tooth, don’t have particularly high cholesterol, and have never evinced any diabetic symptoms, it’s probably not worth the investment. The essential test associated with ‘pre-diabetes’ or hypoglycaemia is a glucose-tolerance test (GTT).
5. Sequence your genome
According to the Australian government’s National Health and Medical Research Council (NHMRC):
Rapid advances in DNA sequencing technologies now allow an individual’s whole genome to be sequenced. Although this is still relatively expensive, it is likely that in the near future it will become affordable and readily available.
Ah, that other country, the near future. But it is a fact that the price is coming down, from $10 million in 2005 to a mere $1 million in 2007 when James Watson’s genome was sequenced. The going rate in 2012 was under $10,000, and this year (2014) the Garvan Institute of Medical Research in Sydney became one of only three institutes in the world to deliver whole sequenced genomes at under $1000. However, there’s a problem. Your genome will mean nothing to you without expert analysis and interpretation, at a hefty price tag. So what would be the purpose, from a health perspective, of ‘doing your genome’? If you’re already quite healthy, do you want to spend up to $1000 only to find out that you carry a gene which may pre-dispose you to a disease that’s currently non-preventable? Our genome is very complex, so much so that current thinking on the subject, and especially on the introns, the sections that don’t code for proteins, has become more cloudy than ever. We know, or think we know, that the number of introns an organism has is positively correlated with that organism’s complexity, but that’s about all we know for sure, and considering the enormous complexity of the interaction between genetics and environment, together with our lack of knowledge of the role of so much of our genome (over 98% of which is non-coding DNA), the question of whether it’s worth sequencing at this time is a live one. Of course if the price comes down to $100, or the price of a latte (which will soon be up around that figure) then it’d be well worth it; you would have it there awaiting scientific breakthroughs on all that non-coding stuff.
6. microbiome
If you’ve been paying attention to the world of human health, you’ll know that the microbiome is all the rage at the moment. the term was coined by Joshua Lederburg, who defined it thus, according to Wikipedia:
A microbiome is “the ecological community of commensal, symbiotic, and pathogenic microorganisms that literally share our body space.”
You may well have heard the impressive statistic that you have ten times more bacterial cells (and, most interestingly, archaean cells) growing on or in you than bodily (eukaryotic) cells, though this might become less impressive when you learn that the combined weight of those cells amounts to only a few hundred grams. Still, recent research on the microbiota has turned up some interesting results, especially for health. One finding, which may make it difficult to assess your own microbiome, is that different sets of microbes appear to perform the same function for different people. So you won’t just need to know the genetic content of your microbiome, but its function. Still, we can learn a lot already from our microbiome, according to Catalyst, the ABC science program. For example, we inherit a lot of bacteria from our mothers, via her breast milk, not only directly but because the sugars in breast milk encourage the growth of particular types of bacteria. Most of this gut bacteria does its work in the large intestine or bowel region. They’re anaerobic beasties, so they die when exposed to air. However, recent technological developments (and how often can that story be told) have allowed us to learn far more about them, by sequencing their genes inside the gut. From this we’ve learned that our gut bacteria are vital components of our immune system. And since these bacteria rely on our own diets for their nourishment, the kind of microbiome we have is profoundly related to what we eat. A diverse microbiome results, apparently, from eating a high-fibre diet, and low-fibre processed food, and the ingesting of antibiotics, is reducing that diversity, and contributing to multiple health problems. It appears that a less diverse microbiome finds itself under stress, leading to inflammation, an immune response that can damage our own tissue. As a sufferer from bronchiectasis, a chronic (and incurable) inflammation of the airways due probably to early childhood damage, I’m particularly concerned to limit the extent of inflammation through diet and exercise, so this is probably the aspect of my health I’m most concerned to monitor. And there’s also the relationship between gut bacteria and obesity. Some 62% of Australians are overweight or obese, and I’m one of that majority, and trying not to be.
It has been shown clearly, in mice at least, that a high-fibre diet reduces bronco-constriction, improving resistance to asthma and other airways conditions such as COPD. This is mainly due to the production of short-chain fatty acids by particular bacteria. The short-chain fatty acids are produced though the digestion of dietary fibre. Interestingly, acetate, found in vinegar, is a short-chain fatty acid, and a natural anti-inflammatory, so that’s something I should include regularly in my diet.
Finding out what your particular microbiome is, and how it might align with your health, is a simple if rather unpalatable and ‘intimate’ process. You can apply for a kit from the American Gut Project, an organisation dedicated to researching microbiota. The kit is for obtaining a sample of your ‘biomass’ as they call it, which you then send back to the AGP for analysis. All of this was spelt out in the above-linked Catalyst program, but since that program was aired two months ago, the AGP has been inundated with more biomass than it can deal with, so there’s been a backlog of logs, as it were. I plan to send for a kit anyway. The AGP sends back the results, apparently, with hopefully an analysis of the microbiome easy enough for a layperson to understand.
So there’s six areas to look at, either independently or with the help of your GP or other professionals, in terms of measuring how you’re going in terms of overall health, and there are many more aspects of your bodily chemistry and physiology to check up on – hormones, neurotransmitters, bone density, sight, hearing, lung capacity and so forth. Or you can follow the standard advice on diet and exercise, try to avoid stress and hope for the best. And above all don’t stop laughing and dancing, otherwise life would hardly be worth living.
how much damage is synthetic fertiliser doing to soil?
“A nation that destroys its soil destroys itself.” – Franklin D. Roosevelt
In a recent conversation, in which I was accused of being too black-and-white about the positives of conventional agriculture and GMOs, the damaging effects of synthetic fertiliser were mentioned as a negative, as it ‘kills the soil’s organisms, including earthworms’.
So now I’m going to focus on that issue specifically, and follow the evidence where it leads me. There’s no doubt that intensive agriculture and mono-cropping are having a negative impact on soil quality, just as there’s no doubt that intensive agriculture is currently required to feed the world’s human population. So what’s to be done? First, we could reduce or stabilise the world’s population, which we’re trying to do. Second, we can try to find biotech solutions, developing a type of intensive agriculture that’s less damaging to the soil and the environment – and organic approaches might help us in this. GMOs also offer promise, developing crops which require less in the way of fertilisers and pesticides, and deliver higher yields.
There are other ways of looking at this and so many other problems, as I’ve recently become aware of complexity theory, which I’ll write about soon, but for now I’ll look at the claims being made and the solutions being offered.
So what exactly is synthetic or chemical fertiliser doing to our soil? Needless to say, in order to obtain accurate data in answer to this question we have to negotiate our way through sources dedicated to maximising, or minimising, the harm being done. So I’ll start with a definition. Here’s one from a website called Diffen, dedicated apparently to making unbiased comparisons between rival goods and services, in this case chemical v organic fertilisers.
A chemical fertiliser is defined as any inorganic material of wholly or partially synthetic origin that is added to the soil to sustain plant growth. Chemical fertilisers are produced synthetically from inorganic materials. Since they are prepared from inorganic materials artificially, they may have some harmful acids, which stunt the growth of microorganisms found in the soil helpful for plant growth naturally. They’re rich in the three essential nutrients needed for plant growth. Some examples of chemical fertilisers are ammonium sulphate, ammonium phosphate, ammonium nitrate, urea, ammonium chloride and the like.
Diffen goes on to describe the pros and cons, but there isn’t much detail beyond high acidity and ‘changes to soil fertility’. A 2009 article in Scientific American goes further, describing these mostly petroleum-based fertilisers as having these dire effects:
wholesale pollution of most of our streams, rivers, ponds, lakes and even coastal areas, as these synthetic chemicals run-off into the nearby waterways.
What this article doesn’t mention is that human waste (i.e feces), grey water etc is also getting into our waterways and causing damage, and it’s hard to separate out these many forms of pollution. In any case, I’m confining this piece to direct damage to the soil rather than to waterways, important though that obviously is.
One of the principal causes of soil degradation is leaching, the loss of water-soluble plant nutrients through rains and storms, and irrigation. Fertiliser can contribute to this problem. When nitrate (NO3) is added to the soil to boost plant growth, excess NO3 ions aren’t able to be absorbed by the soil and are eventually leached out into groundwater and waterways. The degree of leaching depends on soil type, the nitrate content of the soil, and the degree of absorption of the nitrates by the plants or crops on that soil. Again, though, the leaching is caused by water, and the soil degradation is largely a natural process, though over-irrigation can contribute. This is why the older soils, such as those in Australia, are the most lacking in nutrients. They’ve been subjected to eons of wind and water weathering. The richest areas have been renewed by volcanic activity.
Not all chemical fertiliser is the same, or of the same quality. Phosphate fertilisers commonly contain impurities such as fluorides and the heavy metals cadmium and uranium. Removing these completely is costly, so fertiliser can come in grades of purity (most backyard-gardener fertiliser, the stuff that comes in little pellets, is very pure). Many widely used phosphate fertilisers contain fluoride, and this has prompted research into the effects of a higher concentration of fluoride in soil. The effect on plants has been found to be minimal, as plants take up very little fluoride. Livestock ingesting contaminated soils as they munch on plants could be a bigger problem, as could be fluoride’s effect on soil microorganisms. Fluoride is very immobile in soil, so groundwater is unlikely to be contaminated.
Acidification from the regular use and over-use of acidulated phosphate fertilisers has been a problem in some areas, particularly in Malaysia and Indonesia, where aluminium toxicity has caused severe soil degradation. Acidity of soils is a serious problem in Australia, where in NSW more than half the agricultural land is affected. Most agricultural plants require a pH of 5.5 to 8.0 to grow best, though some plants are much more tolerant than others of lower pH levels. Surface acidity can be corrected with the application of ground limestone, but subsurface acidity is a growing problem and much more difficult to correct. Acidification is generally a slow natural process caused by wind and water weathering, but it can be greatly accelerated by the use of fertilisers containing ammonium or urea. It can also be caused by a build-up of organic matter. As an example of the complexity of all this, superphosphate doesn’t directly affect soil acidity but it promotes the growth of clover and other legumes, a build-up of organic matter which increases soil acidity.
A comment on fertiliser and worms. No, they don’t kill worms, and because they stimulate plant growth they’re likely to increase the population of worms – but there are worms and worms. Some are highly invasive and have been transported from elsewhere. Some can be damaging to plants. At the same time new plants, and new worms, tend to adapt to each other over time. Again, complexity cannot be underestimated.
Another concern about chemical fertiliser, again not connected to soil quality as such, is nitrous oxide emissions. About 75% of nitrous oxide emissions from human activity in the USA came from chemical fertiliser use in agriculture in 2012, and we are steadily adding to the nitrous oxide levels in the atmosphere. Nitrous oxide is a greenhouse gas which, on a unit comparison, is 300 times more damaging than carbon dioxide.
In conclusion, it’s likely that everything you do in agriculture has a downside. There are no free lunches. The key is to obtain as much knowledge as possible, not only about your patch, but about nutrient and resource cycles generally. It’s all connected.
Oh and above all be sceptical of some of the ridiculous claims, and the ridiculous propaganda, out there. Check them out on a reputable, evidence-based site.
bronchiectasis – the story so far
I’m sorry I’ve not been as polyphiloprogenitive (yeah) in my posting lately, with health issues both mental and physical, and work commitments having an impact. So, now I’m going to mix the personal and the general in this glimpse into the complexities of public healthcare.
I’ve been trying for some time to get a proper diagnosis on lung and airways problems that have been plaguing me for some 30 years. Today, a young doctor summarising my condition after a blood test, an x-ray, a CT scan, a bronchoscopy, a biopsy, and a series of lung function tests, used (in passing) the term ‘bronchiectasis’, not for the first time. It was first used a few weeks ago, in the radiologist’s report on my CT scan, and that was the first time I’d heard the term.
Anyway, the analyses and the reports are now done with, and the only treatment offered is a three-month course of broad-spectrum antibiotics, a half-tab a day, to try to clear up some current bugs and give me a fighting chance for the future. The antibiotics may also act as anti-inflammatories, slightly and temporarily relieving the problem of my dilated airways, but there’s no permanent solution, no cure.
Here’s what the USA’s National Heart, Lung and Blood Institute has to say about bronchiectasis:
Bronchiectasis (brong-ke-EK-tah-sis) is a condition in which damage to the airways causes them to widen and become flabby and scarred. The airways are tubes that carry air in and out of your lungs. Bronchiectasis often is caused by an infection or other condition that injures the walls of the airways or prevents the airways from clearing mucus. Mucus is a slimy substance. It helps remove inhaled dust, bacteria, and other small particles from the airways. In bronchiectasis, your airways slowly lose their ability to clear out mucus. The mucus builds up, and bacteria begin to grow. This leads to repeated, serious lung infections. Each infection causes more damage to the airways. Over time, the airways can’t properly move air in and out of the lungs. As a result, the body’s vital organs might not get enough oxygen. Bronchiectasis can lead to serious health problems, such as respiratory failure, atelectasis (at-eh-LEK-tah-sis), and heart failure.
This makes for very grim reading. It sounds like a slow, overall decline is inevitable, though I’m not feeling too pessimistic, perhaps because it hasn’t sunk in yet. There’s little point in trying to pinpoint the initial infection or set of infections that set the ball rolling. My latest doctor, at the Adelaide Chest Clinic, suggested a series of infections when very young, most likely in my earliest childhood, set the stage for the present situation, but that surely is the wildest speculation, with no detailed medical history to go on. Or rather, no medical history at all really. I do remember my mother saying she was worried about my health as a young child because I was so skinny, but I don’t recall that I had any lung or airways problems.
This medical journey has been interesting. I don’t really have a regular doctor, and generally avoid regular visits, in my male way, but when I need to go I visit the Hindmarsh Medical Clinic nearby, and take whatever doctor’s available. So when chesty complications arose after I got what I think was a dose of the flu late last year, I took myself to this clinic to get what I usually get when this happens, a dose of antibiotics. It was the first time I’d been to a doctor about this in a few years. I’ve been on a bit of a health and fitness kick, losing a lot of weight and engaging in regular, if low level, exercise. I like to think these efforts have helped me even with my bronchiectasis, because before that I was having to take antibiotics at least once a year for quite a few years. And before that, I would just put up with what I called ‘the wet webs’, which would wax and wane in terms of hampering my life.
However, they always did hamper my life, affecting my self-confidence, increasing my self-consciousness. I’d avoid people and crowds, worried about my breath and my tendency to break into coughing fits, or have my voice caught in the webs mid-sentence, resulting in intense and embarrassing throat-clearing. But I was also worried about the effects on my throat, which would catch at the slightest hint of cigarette smoke, dust or ‘funny air’. My experience with food and drink, too, has sometimes been a problem. Nothing worse than having a cough explode out of you when your mouth is full of lamb korma (spicy food is a ticklish subject) or your host’s best French champagne. Also, any not-quite-right cuisine would give me a ‘furry tongue’ feeling, a tell-tale first sign of a full-blown, phlegmy infection.
Anyhow, it was only after some years of putting up with this that I betook myself to a doctor, on an occasion when the phlegminess wouldn’t clear up by itself and was clearly getting worse. That was my first experience of antibiotics, and they seemed to always do the trick, so I began to rely on them, all the while reflecting on tuberculosis and consumption and marvelling that the modern world of antibiotics had saved me from the fate of Keats, Balzac, the Brontës, Chekhov, Lawrence, Kafka, Orwell and so many others, known and unknown – that of more or less drowning in my own phlegm.
So it was a bit of a surprise when, back in December and January, I found that the little magic pills didn’t work any more. I was prescribed two separate, different batches, both ineffectual. So the doctor organised a blood test and an x-ray. The blood test indicated that I was becoming anaemic, and the x-ray indicated a cloudy, indeterminate patch in my upper right lung. The Hindmarsh doctors were now slightly more animated about my condition. I was questioned closely about my medical history, especially my smoking history. I was a light smoker in my youth and gave up in my mid-twenties, over thirty years ago. The doctor sent me for a CT scan, which, depending on what resulted from it, might be followed by a colonoscopy. He was particularly concerned about the anaemia, which was unlikely to be caused by poor diet.
To over-simplify, there are 3 main types, or causes of, anaemia. First, there’s blood loss, either of the rapid kind (haemorrhaging caused by an accident or major trauma) or the slowly leaking kind, which can have a variety of causes, including cancer. Second, there’s destruction of the red blood cells (hemolysis), which also has many causes, such as bacterial infections. The third is deficient red blood cell production. I now presume my anaemia was of the hemolytic type, but my doctor probably worried about blood loss as a result of bowel or colon cancer, though I didn’t have much in the way of gastrointestinal symptoms.
So I went off for my first ever CT scan, a fascinating experience in itself, and a few days later, once Hindmarsh had received the radiologist’s report, I made an appointment to discuss the findings. When I arrived the receptionist gave me a copy of my CT scan and the radiologist’s report, which I read in the waiting room. It was pretty hard to digest. First it reiterated the finding of the x-ray – ‘ill-defined shadow right upper lobe on recent chest x-ray – pulmonary mass’. Then the radiologist, a Dr Ron Edwards, presented his own findings:
There is extensive abnormality in the right lung more marked in the upper lobe with dilated, thick walled bronchi consistent with bronchiectasis, evidence of mucus plugging and areas of confluent parenchymal density, the appearance is thought to be that of inflammatory change most probably allergic bronchopulmonary aspergillosis. The left lung is fully expanded and clear. No pleural abnormality is seen on either side. There is no hilar or mediastinal mass or lymphadenopathy. No abnormality is seen in visualised upper abdominal organs.
Conclusion: Extensive abnormality in the right lung particularly the upper lobe consistent with inflammatory change most probably allergic bronchopulmonary aspergillosis although correlation with history and clinical findings is suggested.
At first I thought this doctor just liked parading his polysyllables, but then I was prepared to give him the benefit. I’d try to tease it all out and look up the key terms on the net when I got home, and meanwhile my Hindmarsh doctor might further enlighten me.
The doctor in this consultation wasn’t my usual one, and his response to the radiologist’s report was ‘eh? I can’t make head nor tail of this’, which was kind of reassuring, but after a few minutes of examining it and looking up other references, he recovered enough to say that the next step was a visit to the Adelaide Chest Clinic for a probable bronchoscopy to try to get clarification or confirmation of the finding. He told me that aspergillosis was a fungal infection which generally required long-term antibiotic, or rather antifungal medication to clear it up. The good thing, though, was that there was no sign of cancer. I asked whether the aspergillosis, if that’s what I had, might be the cause of the anaemia, and he said, ‘oh yes, most definitely’.
So I went home, looked up as much as I could on the net, and waited to hear from the chest clinic. I soon received a letter which gave me an appointment time for six weeks later, and which pointed out that this was a consultation only. I was annoyed at the long delay, especially as my cough and my phlegm problems weren’t getting any better. Yet somehow the idea that I might have a fungal infection (and I now imagined I could feel the spores in there when I sucked air into my lungs) gave me a strange hope, as if shifting this gunk, with whatever difficulty, would solve all my bronchial problems once and for all. I read, too, about bronchiectasis, but preferred to banish it from my mind.
Eventually, consultation day at the chest clinic arrived. The doctor, a brisk young fellow of Asian appearance but with an Aussie accent, immediately asked to see the CT scans I’d brought with me. He pronounced them ‘rather alarming’ and proclaimed that I wouldn’t have been kept waiting for six weeks like this had he seen them before. The doctor’s note hadn’t prepared him for this. He beckoned me over to look at the scans pegged to the screen – ‘no, no, closer, look… This cloudy mass here, most unusual, and only in one lung. See this lung? That’s how a lung should look. But this, this… Mmmm, I don’t know… we’ll have to have some further tests.’
I already knew this, but again I was somehow reassured. If this cloudy stuff could be removed, my lungs, or rather, my lung, might be returned to its pristine state and I’d be cured.
But it seemed to me that he wasn’t aware of the radiologist’s report. I had it with me, and I mentioned the possibility of aspergillosis. To my surprise the doctor waved away the report as I started rummaging in my bag for it. He looked quite disdainful in fact. ‘We can’t tell what it is, that’s why we’ll need to do a bronchoscopy, and take some material out of the lung..’
He then began to question me on my medical history, especially my history of smoking, just as my Hindmarsh doctor had. When he asked me about how long I’d been having these throaty infections, I talked about my term ‘the wet webs’, which I’d been using since the eighties, but he cut me off, seemingly bored or irritated by this flight of fancy. He asked me about exposure to chemicals or any other potentially damaging agents, but I couldn’t enlighten him. In fact, when I began to tell him about a dodgy, salt-damp-ridden flat I’d rented more than 20 years ago, and which I’d since considered might be a factor in my ill-health, he again cut me off as if it was obviously irrelevant. Finally, he took me through the process of a bronchoscopy and a lung function test, scheduled for a week and a fortnight’s time respectively.
At the end I had to ask, ‘so do you have any real idea what this infection or blockage of the lung might be?’ He shrugged, ‘It could be one of many things. It could be aspergillus. It could be cancer – but I don’t think it’s cancer. The biopsy should clear this up for us.’
It wasn’t really until after this consultation was finished that I looked back on it with some irritation. I was particularly annoyed that this doctor had waved away the radiologist’s report. Why? Was there some rivalry between radiologists and chest clinicians as to the reading and interpretation of CT scans? If so, should there be? Surely radiologists look at these scans day in day out, perhaps over many years. Or – who knows? – maybe this report was by a young radiologist keen to impress, and the clinician had seen too many over-ambitious reports that missed the mark completely. In any case, I’d taken the report seriously, enough to familiarise myself a little more with bronchiectasis, aspergillosis, hilar and mediastinal mass, parenchymal density, and lymphadenopathy. And I don’t think these efforts were wasted. Even after a brief perusal of this report, my Hindmarsh doctor was able to assure me that I didn’t have cancer. But the clinician, having dismissed the report sight unseen, had again raised the cancer spectre. Surely this was highly irresponsible – though I was quite confident that cancer was a non-issue.
So next on the agenda was the bronchoscopy, which from my perspective was a non-event. I arrived at the hospital at about 8.30 and was released around midday. This was my first experience as a hospital patient since an ear operation as an eight-year-old, nearly fifty years ago. I’d been told of the risks, of course, which included pneumothorax or a collapsed lung as the worst case scenario, and I was nervous of hospital infections and the like, but all seemed to go well. In fact I was amazed at the magic of modern anaesthesia, because at one instant I was on an operating table with three medicos about me chatting and faffing about with tubes, and in another instant I was back in the ward, coughing and spluttering just as before, and it seemed only half an hour or so had passed. So I’d both lost and recovered consciousness instantaneously, and surely a whole book could be written about the science involved in this, and if one has been written I’d love to read it.
The aftermath was interesting though. I felt quite chirpy on being given the all clear at about midday, and we had a pleasant meal in the hospital canteen, on a balcony overlooking the botanical gardens. But by the time I got home I was feeling quite drained, and I slept on and off for the next 24 hours. I took several days to recover the old circadian rhythm. Nine days later I was back at the hospital’s thoracic unit having a lung function test, and later in the afternoon I had another consultation at the chest clinic. It was another doctor this time, a tall kindly-seeming young man who appeared to be an intern, from his general sense of unease and uncertainty. He clearly knew nothing about my case, and sat staring at some records on his computer while I waited faux-patiently. Finally he excused himself, saying he needed to consult with his boss. He returned, seemingly a little more sure of himself. He told me, as I’ve already related, that I had damaged airways, probably incurred as a very young child, and this has led to me having regular infections over the years. This would likely continue, because bronchiectasis was a difficult, essentially untreatable condition. I pulled him up on the term, saying I’d done some research on it, to which he replied, ‘Well then you’ll understand that there’s nothing more we can really do.’ I asked then about the white cloudiness in my lung, which I’d hoped could be particularly targeted. He just shrugged, as if to say it was just another one of my regular infections. I took from this that there was no sign of aspergillus after all. ‘What we can do, which should help in the short run, is prescribe for you some’ – and here he mentioned a drug of some sort, which I didn’t catch – ‘which you should take at a half-tab a day for the next three months, and that should clear up any existing bugs in your system. I’ll arrange that with your doctor, and you won’t need to come back here again.’
I felt that I’d been politely, if rather awkwardly, dismissed, and I left the consulting room in something of a daze. I took a wrong turning, and after walking down a winding corridor I found myself suddenly at the entrance to the clinic, having by-passed the reception area where I came in. I stepped outside, vaguely wondering if I was supposed to have paid some money or signed some forms, but I had no desire to turn back.
I felt something like futility, that these past few weeks had taken me nowhere. I had a diagnosis of sorts, but bronchiectasis, I knew, was an often undiagnosed and somewhat neglected condition. There was nothing sexy about it. It wasn’t life-threatening like tuberculosis or pneumonia, though it would probably be the death of me in the long run. It wasn’t of course a disease in itself, rather a facilitator of disease and infection. What frustrated me, as I reflected on the situation over the next few days, was that nobody had been straight enough with me to say ‘you have bronchiectasis, this is your prognosis – within broad parameters – and this is how you might manage your condition in future…’
I’d spoiled myself. I’d been reading one of Oliver Sacks’s recent works, The Mind’s Eye. I’d read Sacks before, and I’d been very impressed with his manner and his reflections on seeing him at Adelaide Writers Week a few years back. But I couldn’t help but notice the difference between his medical practice in good old New York City and my experience in good old Adelaide. It seems that most of Sacks’s patients not only have unusual and trend-setting neurological conditions, they also seem to be overwhelmingly talented musicians, writers, artists or fellow physicians, most of whom seem to end up becoming his BFFs and regular swimming partners. Filthy lucre never gets mentioned, of course, but it’s all a long way from my experience as a nonentity on the national health scheme, where I have to deal with an array of medicos none of whom even know me by name.
Of course I’m lucky that I get to have highly trained doctors anaesthetising me, pulling bits out of my lungs, and using sophisticated machines to light up my chest cavity or to measure my lungs’ functionality, all at very little cost to myself, but in the end there’s a condition I have, barely referred to by my doctors, with is untreatable and largely uninteresting, and I just have to live with it. Of course I should get my flu shots regularly, but no doctor has given me this advice. The fact is, I’ve learned much more about my condition through the internet than through the medical system, and that suggests my future direction. Go to reliable websites, obtain all my own medical records as far as I’m able, and become as self-reliant as is medically possible.
I’m lucky, too, that I don’t feel sick. I have the occasional coughing fit, and a more or less regular cough, but it isn’t painful and it isn’t getting appreciably worse. My situation seems to have stabilised, and I’m able to go to work regularly and do a reasonable job. I do feel tired more than I would like to, but that might be age, or it might be a psychosomatic reaction to the knowledge that I have some kind of blood-loss (i.e. not iron-deficiency) anaemia. In his book The Heretics, Will Storr summarises recent findings about the placebo effect:
A 1998 study by researchers at the University of Hull found that up to 75% of the effect of brand-name antidepressants such as Prozac might be down to placebo; Professor David Wootton of the University of York has written of one estimate that indicates that ‘a third of the good done by modern medicine is attributable to the placebo effect’; while an acknowledged world expert, the University of Turin’s Professor Fabrizio Benedetti, has gone so far as to say that ‘Placebo is ruining the credibility of medicine’.
To me, this is all more fascinating than disturbing, but it’s obvious to me that these psychological effects work both ways – if you’re told that you’re anaemic, and that physical fatigue is one of the symptoms, you’ll surely slow down more than if your anaemia is unknown to you. What’s more I have no idea how anaemic I currently am, just as I have no idea whether my bronchiectasis is severe or mild.
I saw my original Hindmarsh doctor a few days ago, almost two weeks after my final visit to the chest clinic. He hadn’t received any word from the clinic about antibiotic medication, but he had received some kind of interim report from them. To my surprise, there were signs of mycology in the lung, and it seemed they were still in the process of analysing the data, or at least that’s what my doctor surmised from the lack of communication about treatment. On this occasion I grumbled a bit more than I usually do about the slowness of the process towards treatment, and the lack of clear communication about my condition. I asked about medical records, and the doctor was quite happy to facilitate that, though I sense that I’ll have to keep on about it to make it happen. I also mentioned my anaemia, and whether I could have a blood test to see if it was improving or worsening. I also complained of slightly darker and strong-smelling urine, so blood and urine tests were arranged on site immediately. Interestingly, after the blood was taken (and I was surprised by how much was taken out) I walked home – a 15 minute walk – and immediately conked out, falling asleep at about 4pm and waking up at about 11.30 the same night, which again disrupted my sleeping patterns for a while. Yesterday I received a call from reception at Hindmarsh. Apparently some word has been received from the chest clinic, so at last I’m to have some medication, I hope.
So that’s the story so far. Interesting thoughts on perception and reality, though. Having only recently learned about mycology and aspergillus, I became more or less convinced that I was indeed suffering from a fungal infection. I could feel it in my lung. Hard to describe the sensation, but something cold and vaguely furry, spore-like. Of course I knew that the information about aspergillus was infecting my perception, and yet…
And then, at my final consultation at the chest clinic, I was led to believe that there was no aspergillus. I was to take a broad-spectrum antibiotic, not an anti-fungal, and that might or might not clear up the bugs in my system. So what was I to make of my perceptions?
Enough, though, for now, as this blog post has gone on long enough, and I’ve not posted in a long time. There will be more though on this subject, as I’ve been to the doctor again, and have obtained some interesting medical records, and the mycology question is still unresolved.
food irradiation and the organic food movement
Food irradiation is a well-known process for preserving food and eliminating or reducing bacteria. It’s used for much the same purpose that pressure cooking of tinned food is used, or the pasteurization of milk. All food used by NASA astronauts in space is irradiated, to reduce the possibility of food-borne illness.
advantages and disadvantages of irradiation
According to the US Department of Health’s Center for Disease Control and Prevention (CDC), irradiation, if applied correctly, has been clearly shown to reduce or eliminate food pathogens, without reducing the nutritional value of the food. It should be noted that irradiation doesn’t make food radioactive. I’ll look at the science of irradiation shortly.
Of course it’s not a cure-all. For example, it doesn’t halt the ageing process, and can make older fruit look fresher than it is. The reduction in nutritional value of the food, caused by the ageing process, can be masked by irradiation. It can also kill off bacteria that produce an odour that alerts you that the food is going off. Also, it doesn’t get rid of neurotoxins like those produced by Clostridium botulinum. Irradiation will kill off the bacteria, but not the toxins produced by the bacteria prior to irradiation.
how does food irradiation work?
Three different types of irradiation technology are used, using gamma rays (cobalt-60), electron beams and x-rays. The idea is the same with each, the use of ionising radiation to break chemical bonds in molecules within bacteria and other microbes, leading to their death or greatly inhibiting their growth. The amount of ionising radiation is carefully measured, and the radiation takes place in a special room or chamber for a specified duration.
When radioactive cobalt 60 is the energy source, it’s contained in two stainless steel tubes, one inside the other, called ‘source pencils’. They’re kept on a rack in an underground water chamber, and raised out of the water when required. The water isn’t radioactive. Food products move along a conveyor belt into a room where they’re exposed to the rack containing the source pencils. Gamma rays (photons) pass through the tubes and treat the food. The cobalt 60 process is generally used in the USA.
An Electron-beam Linear Accelerator generates, concentrates and accelerates electrons to up to 99% of light-speed.These electron beams are scanned over the product. The machine uses energy levels of 5, 7.5 or 10 MeV (million electron volts). Again the product is usually guided under the beam by a conveyor system at a predetermined speed to obtain the appropriate dosage. This will clearly vary with product type and thickness.
The X-ray process starts with an electron beam accelerator targeting electrons on a metal plate. The energy that isn’t absorbed is converted into x-rays, which, like gamma rays, can penetrate food containers more than 40cms thick. Shipping containers, for example.
Most of the radiation used in these processes passes through the food without being absorbed. It’s the absorbed radiation, of course, that has the effect, destroying microbes and so extending shelf life, and slowing down the ripening of fruits and vegetables. The potential is there for food irradiation to replace chemical fumigants and fungicides used after harvest. It also has the potential, through the use of higher doses, to kill contaminating bacteria in meat, such as Salmonella.
Food irradiation is a cold treatment. It doesn’t significantly raise the temperature of the food, and this minimises nutrient loss or changes in texture, colour and flavour. The energy it uses is too low to cause food to become radioactive. It has been compared to light passing through a window. Food irradiation uses the same principle as pasteurization, and can be described as pasteurization by energy instead of heat, or cold pasteurization..
the use of food irradiation in Australia
Due largely to fears about irradiation having to do with radioactivity and nuclear energy, the process isn’t used as widely in Australia (or indeed the USA) as it could be. Irradiation is used in some 50 countries, but the level of usage varies for each country, from very limited in Austria and other EU countries, to a very widespread usage in Brazil. Food Standards Australia New Zealand (FSANZ) summarises our situation thus:
In Australia and New Zealand, only herbs and spices, herbal infusions, tomatoes, capsicums and some tropical fruits can be irradiated.
FSANZ has established that there is a technological need to irradiate these foods, and that there are no safety concerns or significant loss of nutrients when irradiating these foods.
Irradiated food or ingredients must be labelled clearly as having been treated by ionising radiation.
food irradiation, health and safety
Since 1950 hundreds of studies have been carried out on animals fed with irradiated products, including multi-generational studies. On the basis of these studies, food irradiation has been approved by the World Health Organization, the American Dietetic Association, the Scientific Committee of the European Union and many other national and international monitoring bodies. Of course this hasn’t stopped many individuals and organisations from complaining and campaigning against the practice. Concerns include: chemical changes harmful to the consumer; impairment of flavour; the destruction of more ‘good’ than ‘bad’ bacteria; and that it’s an unnecessary process which runs counter to the movement towards regional product, seasonality and real freshness. I’ve already mentioned other problems, such as that it can mask spoiled food, and that it doesn’t destroy toxins already released by bacteria.
opposition from the organic food movement
Food products must be irradiation-free if they are to certified as ‘organic’, in Australia and elsewhere. Now, I’ve fairly regularly expressed irritation with the ‘organic’ food ideology, most particularly in this post, but I recognise that it appeals to a very diverse set of people, with perhaps a majority simply believing, on faith, that ‘organic’ food will be more nutritious, safer and better for the environment than conventional food. Most of those people wouldn’t know much about food irradiation, but hey, it sounds dodgy, so why not avoid it? I’ve no great argument to make with such people, apart from the old ‘knowledge is power’ arguments, but there are a few individuals and organisations trying to get food irradiation banned, based on what they claim to be evidence. Unsurprisingly, most of these critics are also ‘organic’ food proponents. I’ll look at some criticisms from Eden Organic Foods, a US outfit, which admittedly represents the extreme end of the spectrum (nature before the fall?).
Firstly, in their ‘factsheet’ on irradiation, linked to above (and reprinted verbatim here by another alarmist organisation, the Center for Food Safety), they waste no time in informing us that the beams used are ‘millions of times more powerful than standard medical x-rays’. This sounds pretty scary, but it’s a bogus comparison. Irradiation is designed to kill bugs and bacteria, whereas medical x-rays are for making visible what is invisible to the naked eye. Clearly, the first and foremost concern in testing and studying the technology is to make sure that the chemical changes it induces are safe for humans. Comparisons with medical x-rays are more than irrelevant to this concern, as the author of this factsheet well knows.
Next comes this disturbing claim:
Radiation can do strange things to food, by creating substances called “unique radiolytic products.” These irradiation byproducts include a variety of mutagens – substances that can cause gene mutations, polyploidy (an abnormal condition in which cells contain more than two sets of chromosomes), chromosome aberrations (often associated with cancerous cells), and dominant lethal mutations (a change in a cell that prevents it from reproducing) in human cells. Making matters worse, many mutagens are also carcinogens
Wow. So much for the poor people of Brazil – they’re obviously done for. But how is it that the world’s top scientific agencies missed all these mutagens and carcinogens? Let’s take a closer look.
The term ‘radiolytic products’ simply means the products created by chemical changes that occur when food is irradiated. Similarly, the products created by heat treatment, or simply cooking, might be called ‘thermolytic products’. These are not ‘strange’, they’re quite predictable, for irradiation would be totally ineffective if it didn’t bring about some chemical changes. One of the differences is that radiolytic products are generally undetectable and produce only minor changes in the food compared to the major operation we call cooking. It is, of course, precisely these products that the scientific community scrutinises when determining the safety of irradiated foods.
Interestingly, in an article, dating back to 1999, called ‘Scientific answers to irradiation bugaboos’, for 21st Century Science & Technology magazine, Marjorie Mazel Hecht has this to say:
The July 1986 report of the Council for Agricultural Science and Technology (CAST), which reviewed all the research work on food irradiation, defined unique radiolytic products “as compounds that are formed by treating foods with ionizing energy, but are not found normally in any untreated foods and are not formed by other accepted methods of food processing.”
The report states that “on the basis of this definition no unique radiolytic compounds have been found in 30 years of research. Compounds produced in specific foods by ionizing energy have always been found in the same foods when processed by other accepted methods or in other foods” (Vol. 1, p. 15).
This slightly contradicts the factsheet put out by Idaho University’s Radiation Information Network, which acknowledges the existence of such products while insisting on their nugatory nature:
Scientists find the changes in food created by irradiation minor to those created by cooking. The products created by cooking are so significant that consumers can smell and taste them, whereas only a chemist with extremely sensitive lab equipment may be able to detect radiolytic products.
Needless to say, alarmists thrive on these contradictions. So what evidence is there of mutagenic irradiation byproducts? Well, there are radiolytic byproducts of fatty acids in meat, called alkylcyclobutanones (2-ACBs), first detected a few decades ago, and the research done on them seems to be so far inconclusive. A book entitled Food Irradiation Research and Technology, the second edition of which was published last year, states that ‘knowledge about the toxicological properties of 2-ACBs is still scarce’, and that ‘it may be prudent to collect more knowledge on the toxicological and metabolic properties of 2-ACBs in order to quantify a possible risk – albeit minimal.’ The book describes a number of studies on rats and humans, going into more detail than I can comprehend, but the results have been difficult to interpret and generally not easily replicable in other studies, indicating very minute and hard-to-measure effects. No doubt such studies will be ongoing. As far as I know, 2-ACBs are the only products about which there is any concern.
What is obvious though, in looking at the research material available online, is the difference between the caution, skepticism and uncertainty of researchers compared to the adamantine certainty of such critics as the Center for Food Safety.
But what about polyploidy? Polyploid cells contain more than two paired sets of chromosomes. Eukaryotic cells, those of multicellular creatures, are diploid (two sets), and prokaryotic, bacterial cells are haploid (one set). Polyploidy is regarded as a chromosomal aberration, common in many plants and some invertebrates, but relatively rare in humans. However it is present in humans, and the percentage varies from individual to individual, and within individuals from day to day and week to week, depending on a range of factors including diet, age, and even circadian rhythms. Levels of up to 3-4% in human lymphocytes have been found in healthy individuals, though some researchers have claimed much higher percentages, in liver cells. The overall finding so far is that fluctuations in polyploidy are the norm, and no clear correlation has been found so far between these fluctuations and health profiles. It seems that the biological significance of polyploidy isn’t known.
Critics of irradiation have been going on about polyploidy and other mutations supposedly caused by irradiation for decades, and unsurprisingly, some are fanatically obsessed with the issue, accompanying their rants with long reference lists, mostly from like-minded activists. However, the text Safety of irradiated foods, 2nd edition discusses polyploidy in some detail, with particular reference to a study of malnourished Indian children fed irradiated wheat, a study regularly cited by anti-irradiation activists. It turns out that there were many problems with the study. First, not enough cells were counted to validly pinpoint an effect, such as a change in diet. Secondly, polyploidy is notoriously difficult to detect – superimposed diploid cells can be easily mistaken for polyploid cells under a microscope (in fact when two independent observers looked at the same microscope slides, one found 34 polyploid cells, the other found 9). Further, the study only gave group results rather than individual results, so it wasn’t possible to know whether the polyploidy was restricted to one or two individuals rather than spread over the group. Another problem was that the reference or control group was found to have no polyploidy at all, a very strange finding given that other researchers always found some degree of polyploidy in their subjects, regardless of irradiation or other effects. In fact, the study was so poorly written up that it’s impossible to replicate – for example the exact diet given the children wasn’t described. How was the wheat fed to the children?. Presumably it was prepared in some way, but how? The omission is crucial. The study also didn’t take into account the effect of malnutrition itself on chromosomal abnormalities. And so on.
You get the picture, and it’s the same with other claims about mutations and carcinogens. Every time you look into the claims you find the same problems that no doubt other scientific watchdog organisations have found – poorly conducted studies that either can’t be replicated or haven’t survived replication. That, of course is no reason for complacency, and at least the activists can assist, in their sometimes muddle-headed ways, in improving our knowledge of 2-ACBs, polyploidy and other biological effects, just as the creationists who bang on about a lack of transitional forms, or ‘irreducible complexity’, help us to focus on refutations, clarifications and further evidence.
Finally, food irradiation, while clearly not the zappo-horrorshow that activists are determined to make it, doesn’t replace proper handling techniques and a good instinct about food quality. The fact is, though, that it does increase shelf life, and is a useful tool in our increasingly global economy, where food is shipped from here to there and everywhere, in season and out. If you prefer to eat locally, with fresh and seasonal produce, fine, and we can argue about the sustainability of that approach on a worldwide scale, but let’s none of us pretend that food irradiation is other than what it is. Let the evidence, properly evaluated, be your guide.
What is bluetooth?
This is, at least sometimes, a science for dummies blog, because I’m a dummy about science and I’m here to educate myself, in a way that I’m hoping might be of interest to others.
So here’s something I’m truly ignorant of. Let me start with a definition from ignorance, then see how I can transmogrify it with a bit of research. Bluetooth is a technology used in mobile phones, computers and such, which assists in processing and communicating information more efficiently.
I don’t even know if this is a true definition, apart from its vagueness, but I expect it will have nothing to do with the colour blue or with teeth. So, it’s to Wikipedia I go, for starters:
Bluetooth is a wireless technology standard for exchanging data over short distances (using short-wavelength radio transmissions in the ISM band from 2400–2480 MHz) from fixed and mobile devices, creating personal area networks (PANs) with high levels of security.(I’ve removed the links – don’t want to make things too easy).
So now I’m slightly wiser. The short-wavelength ISM radio bands (Industrial, Scientific, Medical) are internationally reserved for the aforementioned purposes. That’s to say, to the exclusion of telecommunications.
But hang on, bluetooth is a telecommunications technology that apparently works within the reserved band. How does that work? I don’t know.
Anyhow, having read most of the Wikipedia article on bluetooth (I just couldn’t finish it), I definitely have a better understanding of the technology than I did before, despite only comprehending about 5% of the article. Still, I’m not in a position to explain it, even to myself. So now it’s time for How Stuff Works, for a less geeky guide to bluetooth. The following owes a lot to the HSW article “How Bluetooth Works”, but I’ve put it in my own words to wrap my head more tightly around the concept.
Bluetooth is a way of connecting electronic devices to each other, sans wire. You may be thinking Wifi here, but bluetooth is a quite different, though in many ways complementary, technology. It was first developed in the mid-nineties at the labs of the telecommunications company Ericsson, and has developed rapidly since then. It’s greatest advantage over other wireless systems such as the infrared technology used in most TV remotes is that it is more versatile, low-energy and low-cost – but versatility is the key. For example, infrared technology works with ‘line of sight’ – you have to point the remote at the device – and it’s essentially one-way.
Finding a way of connecting devices requires a protocol, a set of commands and responses which essentially make sense of the messages being sent between them. This protocol in Bluetooth technology requires very little transmission power, about a milliwatt of power for each transmission signal. The weakness of the signals are a key in avoiding interference in the all-important ISM band within which Bluetooth networking operates, but they limit the range to distances of about 10 metres. However, Bluetooth is not line-of-sight technology, and can be used effectively, for example, in a small house. Bluetooth can connect as many as eight devices simultaneously, but they don’t interfere with each other because of a technique called spread-spectrum frequency hopping, which means they change frequencies regularly, 1600 times per second, using 79 randomly chosen individual frequencies within a designated range. They make full use of a limited spectrum, and as each transmitting device uses this technique automatically, no two transmitters are likely to be using the same frequency at the same time. They’re also unlikely to disrupt other devices in the ISM range because of the fractional time-periods occupying particular frequencies.
Bluetooth-capable devices come within range of each other and automatically create networks known as piconets. This network may be as simple as one between a mobile phone and its headset, but these piconets, once established, frequency-hop in unison so that they can be in constant contact and can be differentiated from piconets in the vicinity.
Anyway, that’s basically as much as I need to know about Bluetooth. There are other issues around security, which can be interesting and problematic, but not too much of a concern for the average user. The automaticity of Bluetooth is one of its many pain-free advantages, and that’s apparently a help with security too. You can switch your Bluetooth mode to ‘undiscoverable’ so as to avoid contact with other Bluetooth devices, and there are other more elaborate security options.
So, with this knowledge, how do I change my world? I think the answer is – only connect.








